Outreach

The Outreach section contains CEDAR documents of general community interest, and is updated regularly. Click on any of the section links—for example, Publications— to see full listings.

Last Updated: 
Jul 12 2017 - 10:29am
Title Description Release Date
Using Semantic Technologies to Enhance Metadata Submissions to Public Repositories in Biomedicine

Conference paper about how CEDAR enhances metadata submission to public repositories

November, 2018
The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories

Journal article about using the CAIRR pipeline for metadata submission to NCBI

August, 2018
Assessing Schema.org’s Coverage of Terms from Key Biomedical Datasets

Conference paper for the Intelligent Systems for Molecular Biology Conference

July, 2018
Sustainable data and metadata management at the BD2K-LINCS Data Coordination and Integration Center

Journal article about the LINCS project building CEDAR templates and using BioPortal ontologies

June, 2018
CEDAR OnDemand: a browser extension to generate ontology-based scientific metadata

This work presents “CEDAR OnDemand”, a browser extension powered by the NCBO BioPortal that enables users to seamlessly enter ontology-based metadata through existing web forms native to individual repositories

June, 2018
Title Description Release Date
Using CEDAR: Audio Slide Show for LD4All Community

A slide deck presented to the Stanford University Library showing CEDAR's templating capabilities applied in a library context.

April 24, 2017
CEDAR-LINCS Metadata Demonstration 2017

Dr. Daniel Cooper of the LINCS-DCIC project shows the integration of LINCS-DCIC and CEDAR software to create a seamless metadata management framework.

August 2, 2017
Introductory Video for CEDAR: All the Basics

An introduction to the motivation and goals for the CEDAR system.

July 31, 2017
Daniel Cooper at BD2K-LINCS Data Science Symposium

Daniel Cooper's talk discusses how to leverage Big Data using FAIR data principles and CEDAR framework to enable simplification and streamlining of metadata submission workflow.

May 16, 2017
Marcos Martinez-Romero: CEDAR Presentation, June 2016 (in Spanish)

IV International Workshop in Medical Imaging and Integration of Clinical Data 2016.

20-21 June, 2016. A Coruña, Spain.

June 20, 2016
Title Description Release Date
Metadata Best Practices Illustrated with the CEDAR Workbench How CEDAR addresses metadata best practices November 7, 2018
CEDAR: Metadata Tool for ESIP Demonstration the CEDAR Workbench metadata tool for Earth Science Information Partners (ESIP Federation) July 19, 2018
Fast and Accurate Metadata Authoring Using Ontology-Based Recommendations Presentation slides for AMIA 2017 November 8, 2017
Supporting Ontology-Based Standardization of Biomedical Metadata in the CEDAR Workbench Presentation slides for ICBO 2017 September 13, 2017
CEDAR Demo Presentation for LD4All Presentation to LD4All workshop about CEDAR capabilities April 25, 2017
Title Description Release Date
CEDAR: Web-Based Tools for Accelerating the Creation of Standardized Metadata CEDAR Poster for RDA Berlin March 20, 2018
Open Source Solutions for Semantic Knowledge Management The web services BMIR offers the semantic community March 12, 2018
CEDAR Technologies for AIRR Submissions CEDAR AIRR Community Meeting III Poster January 29, 2018
Supporting Ontology-Based Standardization of Biomedical Metadata in the CEDAR Workbench Marcos' CEDAR Poster for ICBO 2017 September 13, 2017
Finding and Reusing Biomedical Datasets using CEDAR Metadata Repository and Tools Debra's CEDAR Poster for Big Data in Biomedicine May 24, 2017
FAIR LINCS Metadata Powered by CEDAR Cloud-Based Templates and Services Daniel's CEDAR Poster for the BD2K-LINCS Data Science Symposium May 16, 2017
SAP – A CEDAR-based Pipeline for Semantic Annotation of Biomedical Metadata Ravi's CEDAR Poster for 10th International Biocuration Conference March 26, 2017
Title Description Release Date
CEDAR Template Model V1.5.0 CEDAR paper describing the template model October 15, 2018
Context Aware Recommendation Engine for Metadata Submission Conference paper about authoring good metadata using context aware recommendation engine December 3, 2015
CEDAR Proposal Text CEDAR proposal to NIH BD2K program October 28, 2014