The Outreach section contains CEDAR documents of general community interest, and is updated regularly. Click on any of the section links—for example, Publications— to see full listings.
|The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories||
Journal article about using the CAIRR pipeline for metadata submission to NCBI
|Assessing Schema.org’s Coverage of Terms from Key Biomedical Datasets||
Conference paper for the Intelligent Systems for Molecular Biology Conference
|Sustainable data and metadata management at the BD2K-LINCS Data Coordination and Integration Center||
Journal article about the LINCS project building CEDAR templates and using BioPortal ontologies
|CEDAR OnDemand: a browser extension to generate ontology-based scientific metadata||
This work presents “CEDAR OnDemand”, a browser extension powered by the NCBO BioPortal that enables users to seamlessly enter ontology-based metadata through existing web forms native to individual repositories
|Embracing Semantic Technology for Better Metadata Authoring in Biomedicine||
Conference paper for the 10th International Semantic Web Applications and Tools for Health Care and Life Sciences Conference
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|Using CEDAR: Audio Slide Show for LD4All Community||
A slide deck presented to the Stanford University Library showing CEDAR's templating capabilities applied in a library context.
|April 24, 2017|
|CEDAR-LINCS Metadata Demonstration 2017||
Dr. Daniel Cooper of the LINCS-DCIC project shows the integration of LINCS-DCIC and CEDAR software to create a seamless metadata management framework.
|August 2, 2017|
|Introductory Video for CEDAR: All the Basics||
An introduction to the motivation and goals for the CEDAR system.
|July 31, 2017|
|Daniel Cooper at BD2K-LINCS Data Science Symposium||
Daniel Cooper's talk discusses how to leverage Big Data using FAIR data principles and CEDAR framework to enable simplification and streamlining of metadata submission workflow.
|May 16, 2017|
|Marcos Martinez-Romero: CEDAR Presentation, June 2016 (in Spanish)||
IV International Workshop in Medical Imaging and Integration of Clinical Data 2016.
20-21 June, 2016. A Coruña, Spain.
|June 20, 2016|
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|CEDAR: Metadata Tool for ESIP||Demonstration the CEDAR Workbench metadata tool for Earth Science Information Partners (ESIP Federation)||July 19, 2018|
|Fast and Accurate Metadata Authoring Using Ontology-Based Recommendations||Presentation slides for AMIA 2017||November 8, 2017|
|Supporting Ontology-Based Standardization of Biomedical Metadata in the CEDAR Workbench||Presentation slides for ICBO 2017||September 13, 2017|
|CEDAR Demo Presentation for LD4All||Presentation to LD4All workshop about CEDAR capabilities||April 25, 2017|
|BioCADDIE Webinar by Dr. Mark Musen||CEDAR: The challenge, the product, the future||December 8, 2016|
|CEDAR: Web-Based Tools for Accelerating the Creation of Standardized Metadata||CEDAR Poster for RDA Berlin||March 20, 2018|
|Open Source Solutions for Semantic Knowledge Management||The web services BMIR offers the semantic community||March 12, 2018|
|CEDAR Technologies for AIRR Submissions||CEDAR AIRR Community Meeting III Poster||January 29, 2018|
|Supporting Ontology-Based Standardization of Biomedical Metadata in the CEDAR Workbench||Marcos' CEDAR Poster for ICBO 2017||September 13, 2017|
|Finding and Reusing Biomedical Datasets using CEDAR Metadata Repository and Tools||Debra's CEDAR Poster for Big Data in Biomedicine||May 24, 2017|
|FAIR LINCS Metadata Powered by CEDAR Cloud-Based Templates and Services||Daniel's CEDAR Poster for the BD2K-LINCS Data Science Symposium||May 16, 2017|
|SAP – A CEDAR-based Pipeline for Semantic Annotation of Biomedical Metadata||Ravi's CEDAR Poster for 10th International Biocuration Conference||March 26, 2017|
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|CEDAR Template Model V1.4.0||CEDAR paper describing the template model, version 1.0||July 6, 2017|
|Context Aware Recommendation Engine for Metadata Submission||Conference paper about authoring good metadata using context aware recommendation engine||December 3, 2015|
|CEDAR Proposal Text||CEDAR proposal to NIH BD2K program||October 28, 2014|